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Table 1 Selected cisapride analogues from the de Novo drug design study

From: Rehabilitating drug-induced long-QT promoters: In-silico design of hERG-neutral cisapride analogues with retained pharmacological activity

Ligands

2D structures

A2Areceptor docking score (kcal/mole)

hERG1 docking score (kcal/mole)

Cisapride

-8.48

-7.80

Cisapride_Frag_337

-9.46

-4.73

Cisapride_Frag_182

-8.66

-5.34

  1. The 10700 small organic molecules fragment database of Schrodinger was used to create new derivatives of cisapride (the place for replacement was previously found by a trajectory analysis of the MD simulations). Molecules were initially docked using virtual high‒throughput screening (VHTS) with subsequent Glide/XP docking for the promising derivatives (~500 compounds). Finally, the inhibitory profiles of these derivatives at hERG1 were tested using Induced Fit Docking.