Gene | Variant allele (rs number, nucleotide) | Effect of the variant allele on toxicity or outcome | Corrected p value, adjusted OR, 95% CI | Effect of the polymorphisms according to the literature | |
---|---|---|---|---|---|
ABCB1 | rs1128503 | c.1236C > T | Increased risk anemia grade 3-4 | p = 0.023; | Homozygous mutant allele carriers: decreased doctaxel clearance in 92 patients 9 |
OR 1.71, 1.07 – 2.71 | |||||
ABCC2 | rs12762549 | g.101620771C > G | Decreased risk anemia grade 3-4 | p = 0.004; | Japanese mutant allele carriers: increased risk for severe neutropenia during treatment with docetaxel in 84 patients19 |
OR 0.51, 0.33-0.81 | |||||
rs2073337 | c.1668 + 148A > G | Decreased need for colony stimulating factor | p = 0.039; | In vitro evidence: paclitaxel is a substrate of ABCC224 | |
OR 0.60, 0.37-0.98 | |||||
ABCC1 | rs2074087 | c.2284-30 G > C | Increased need for erythropoiesis stimulating agent | p = 0.011; | In vitro evidence: resistance to paclitaxel with ABCC1 overexpression23 |
OR 2.09, 1.18-3.68 | |||||
ABCA1 | rs363717 | c.1896 A > G | Increased risk anemia grade 3-4 | p = 0.002; | Mutant allele carriers: decreased risk to develop thalidomide related neuropathy grade ≥2 in 1495 patients 36 |
OR 2.08, 1.32-3.27 | |||||
CYP3A4 | rs4986910 | c.1331 T > C | Increased risk thrombocytopenia grade 3-4 | p = 0.025; | - |
OR 4.99, 1.22-20.31 | |||||
GSTP1 | rs1695 | c.313A > G | Decreased need for colony stimulating factor | p = 0.017; | Mutant allele carriers: decreased oxaliplatin-related neuropathy in 90 patients30, decreased docetaxel-induced grade 2 neuropathy in 58 patients31, decreased risk of hematologic toxicity in 118 patients15 |
OR 0.55, 0.33-0.90 | Heterozygous mutant allele carriers compared to homozygous wildtype allele carriers: decreased PFS following cisplatin-gemcitabine in 104 patients 32 | ||||
ERCC1 | rs11615 | c.354 T > C | Increased risk anemia grade 3-4 | p = 0.031; | Mutant allele carriers: decreased platinum resistance in 60 patients34 |
OR 1.61, 1.04-2.50 | Heterozygous variant allele carriers compared to homozygous wildtype allele carriers: increased risk on severe neutropenia and increased likelihood of overall survival following cisplatin-gemcitabine in 104 patients32 | ||||
ERCC2 | rs1799793 | c.934G > A | Decreased need for colony stimulating factor | p = 0.042; | Heterozygous variant allele carriers compared to homozygous wildtype allele carriers: increased severity of neutropenia following cisplatin-cyclophosphamide in 104 patients32 |
OR 0.63, 0.41-0.98 | |||||
Decreased platinum free interval | p = 0.016, | ||||
HR = 0.75, 0.60-0.95 |